Cell line Tissue Cancer/cell type Species MOI A431 Epithelial Carcinoma Human 5 A549 Lung Carcinoma Human 5 Astrocytes Nervous system Primary Human 1 B16-F10 Epithelial Melanoma, metastatic Mouse 5 BMM Bone Marrow Primary Human 8 […]
What is the termination sequence for U6 promoter?
The termination sequence for the U6 promoter is a series of T’s (5-6) in a row.
What is the U6 promoter transcription start site?
The “G” that you mentioned is in fact the “preferred” transcription start site, however, this can be replaced by any other nucleotide. It’s just that U6 prefers “G” as the […]
Decoys and Tough Decoy (TuD) RNAs
Background Decoy and Tough Decoy (TuD) RNAs are novel technologies for regulating RNA interference (Haraguchi et al., Nucleic Acids Res. 2009; Xie et al., Nature 2012). In short, they are […]
Several shRNAs Validated
5′-GATCCCCGAAAGTACATTTTCAACTGTTCAAGAGACAGTTGAAAATGTACTTTCTTTTTGGAAA-3′ (HIPK2-1376 sense), 5′-AGCTTTTCCAAAAAGAAAAGTACATTTTCAACGTCTCTTGAACAGTTGAAAATGTACTTTCGGG-3′ (HIPK2-1376 antisense), 5′-GATCCCCGAACCACACGTGCTTGGTCTTCAAGAGAGACCAAGCACGTGTGGTTCTTTTTGGAAA-3′ (HIpk2-789 sense), and 5′-AGCTTTTCCAAAAAGAACCACACGTGCTTGGTCTCTCTTGAAGACCAAGCACGTGTGGTTCGGG-3′ (HIPK2-789 antisense). 5′-GATCCCCCAACAGGAGAGTCATTGTTTTCAAGAGAAACAATGACTCTCCTGTTGTTTTTGGAAA-3′ (Gal3-551, sense), 5′-AGCTTTTCCAAAAACAACAGGAGAGTCATTGTTTCTCTTGAAAACAATGACTCTCCTGTTGGGG-3′ (Gal3-551, antisense), 5′-GATCCCCACCTTACATGTGTAAAGGTTTCAAGAGAACCTTTACACATGTAAGGTTTTTTGGAAA-3′ (Gal3-845, sense), and 5′-AGCTTTTCCAAAAAACCTTACATGTGTAAAGGTTCTCTTGAAACCTTTACACATGTAAGGTGGG-3′ (Gal3-845, antisense).
Two shRNAs Targeting Mouse PDXP
Two shRNAs Targeting Mouse PDXP CCGGCAAGCCCAGCCCTTACATGTTCTCGAGAACATGTAAGGGCTGGGCTTGTTTTTG CCGGCTGGAGACCGACATACTCTTTCTCGAGAAAGAGTATGTCGGTCTCCAGTTTTTG
Target sequences for generation of ATG5 or ATG7 siRNAs
Target sequences for generation of ATG5 or ATG7 siRNAs siRNA construct Target sequences (5′–3′) atg5 Construct 1 CAACGTGCTTTACTCTCTA Construct 2 TGAGATAACTGAACGAGAA Construct 3 ATCTGAGCTATCCAGACAA Scrambled GTCCCGGATACCTAATAAA atg7 Construct 1 ACTACAATGGTGACTCTGC Construct 2 […]
Several Stealth Select siRNAs Target Region Sequences
Stealth Select siRNAs targeting ATG5 (no. 1; 5′-GGUUUGGACGAAUUCCAACUUGUUU-3′, no. 2; 5′-GAUCACAAGCAACUCUGGAUGGGAU-3′ and no. 3; 5′-GCCAUCAAUCGGAAACUCAUGGAAU-3′); BECN1 (no. 1; 5′-CCACUCUGUGAGGAAUGCACAGAUA-3′, no. 2; 5′-GGAUGAUGAGCUGAAGAGUGUUGAA-3′ and no. 3; 5′-ACAGUGAAUUUAAACGACAGCAGCU-3′); ATG7 (no. […]
Several Validated siRNAs
Several validated siRNAs Name Sequence (5′-3′) Target SRSF1 siRNA #1 CGGGUUAAAGUUGAUGGGCCCAGAA exon 4 SRSF1 siRNA #2 UAGCAGAUCUCGCUCUCGUACAUAA exon 4 SRSF2 siRNA #1 UCGCCUUCGUUCGCUUUCACGACAA exon 1 SRSF2 siRNA #2 CCCAGUGUCCAAGAGGGAAUCCAAA exon […]
hAsCpf1-NLS-3xHA Sequence
Full Sequence of hAsCpf1-NLS-3xHA Sequence: ATGACACAGTTCGAGGGCTTTACCAACCTGTATCAGGTGAGCAAGACACTGCGGTTTGAGCTGATCCCACAGGGCAAGACCCTGAAGCACATCCAGGAGCAGGGCT TCATCGAGGAGGACAAGGCCCGCAATGATCACTACAAGGAGCTGAAGCCCATCATCGATCGGATCTACAAGACCTATGCCGACCAGTGCCTGCAGCTGGTGCAGCT GGATTGGGAGAACCTGAGCGCCGCCATCGACTCCTATAGAAAGGAGAAAACCGAGGAGACAAGGAACGCCCTGATCGAGGAGCAGGCCACATATCGCAATGCCA TCCACGACTACTTCATCGGCCGGACAGACAACCTGACCGATGCCATCAATAAGAGACACGCCGAGATCTACAAGGGCCTGTTCAAGGCCGAGCTGTTTAATGGCAA GGTGCTGAAGCAGCTGGGCACCGTGACCACAACCGAGCACGAGAACGCCCTGCTGCGGAGCTTCGACAAGTTTACAACCTACTTCTCCGGCTTTTATGAGAACAGG AAGAACGTGTTCAGCGCCGAGGATATCAGCACAGCCATCCCACACCGCATCGTGCAGGACAACTTCCCCAAGTTTAAGGAGAATTGTCACATCTTCACACGCCTGA TCACCGCCGTGCCCAGCCTGCGGGAGCACTTTGAGAACGTGAAGAAGGCCATCGGCATCTTCGTGAGCACCTCCATCGAGGAGGTGTTTTCCTTCCCTTTTTATAAC CAGCTGCTGACACAGACCCAGATCGACCTGTATAACCAGCTGCTGGGAGGAATCTCTCGGGAGGCAGGCACCGAGAAGATCAAGGGCCTGAACGAGGTGCTGAAT CTGGCCATCCAGAAGAATGATGAGACAGCCCACATCATCGCCTCCCTGCCACACAGATTCATCCCCCTGTTTAAGCAGATCCTGTCCGATAGGAACACCCTGTCTTT CATCCTGGAGGAGTTTAAGAGCGACGAGGAAGTGATCCAGTCCTTCTGCAAGTACAAGACACTGCTGAGAAACGAGAACGTGCTGGAGACAGCCGAGGCCCTGTT TAACGAGCTGAACAGCATCGACCTGACACACATCTTCATCAGCCACAAGAAGCTGGAGACAATCAGCAGCGCCCTGTGCGACCACTGGGATACACTGAGGAATGC CCTGTATGAGCGGAGAATCTCCGAGCTGACAGGCAAGATCACCAAGTCTGCCAAGGAGAAGGTGCAGCGCAGCCTGAAGCACGAGGATATCAACCTGCAGGAGA TCATCTCTGCCGCAGGCAAGGAGCTGAGCGAGGCCTTCAAGCAGAAAACCAGCGAGATCCTGTCCCACGCACACGCCGCCCTGGATCAGCCACTGCCTACAACCC TGAAGAAGCAGGAGGAGAAGGAGATCCTGAAGTCTCAGCTGGACAGCCTGCTGGGCCTGTACCACCTGCTGGACTGGTTTGCCGTGGATGAGTCCAACGAGGTG GACCCCGAGTTCTCTGCCCGGCTGACCGGCATCAAGCTGGAGATGGAGCCTTCTCTGAGCTTCTACAACAAGGCCAGAAATTATGCCACCAAGAAGCCCTACTCCG TGGAGAAGTTCAAGCTGAACTTTCAGATGCCTACACTGGCCTCTGGCTGGGACGTGAATAAGGAGAAGAACAATGGCGCCATCCTGTTTGTGAAGAACGGCCTGT ACTATCTGGGCATCATGCCAAAGCAGAAGGGCAGGTATAAGGCCCTGAGCTTCGAGCCCACAGAGAAAACCAGCGAGGGCTTTGATAAGATGTACTATGACTACT TCCCTGATGCCGCCAAGATGATCCCAAAGTGCAGCACCCAGCTGAAGGCCGTGACAGCCCACTTTCAGACCCACACAACCCCCATCCTGCTGTCCAACAATTTCATC GAGCCTCTGGAGATCACAAAGGAGATCTACGACCTGAACAATCCTGAGAAGGAGCCAAAGAAGTTTCAGACAGCCTACGCCAAGAAAACCGGCGACCAGAAGGGC TACAGAGAGGCCCTGTGCAAGTGGATCGACTTCACAAGGGATTTTCTGTCCAAGTATACCAAGACAACCTCTATCGATCTGTCTAGCCTGCGGCCATCCTCTCAGTA TAAGGACCTGGGCGAGTACTATGCCGAGCTGAATCCCCTGCTGTACCACATCAGCTTCCAGAGAATCGCCGAGAAGGAGATCATGGATGCCGTGGAGACAGGCAA GCTGTACCTGTTCCAGATCTATAACAAGGACTTTGCCAAGGGCCACCACGGCAAGCCTAATCTGCACACACTGTATTGGACCGGCCTGTTTTCTCCAGAGAACCTGG CCAAGACAAGCATCAAGCTGAATGGCCAGGCCGAGCTGTTCTACCGCCCTAAGTCCAGGATGAAGAGGATGGCACACCGGCTGGGAGAGAAGATGCTGAACAAGA AGCTGAAGGATCAGAAAACCCCAATCCCCGACACCCTGTACCAGGAGCTGTACGACTATGTGAATCACAGACTGTCCCACGACCTGTCTGATGAGGCCAGGGCCCT GCTGCCCAACGTGATCACCAAGGAGGTGTCTCACGAGATCATCAAGGATAGGCGCTTTACCAGCGACAAGTTCTTTTTCCACGTGCCTATCACACTGAACTATCAGG […]